1KBO

Complex of Human recombinant NAD(P)H:Quinone Oxide reductase type 1 with 5-methoxy-1,2-dimethyl-3-(phenoxymethyl)indole-4,7-dione (ES1340)

Structural Biology Knowledgebase: 1KBO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1KBO

Classification: OXIDOREDUCTASE

Total Structure Weight: 127494.32

Macromolecule Entities
Molecule Chains Length Organism Details
NAD(P)H dehydrogenase [quinone] 1 A, B, C, D 273 Homo sapiens EC#: 1.6.5.2 IUBMB
Gene Name(s): NQO1 Gene View DIA4 NMOR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C, D FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
340
Query on 340

A, B, C, D 5-METHOXY-1,2-DIMETHYL-3-(PHENOXYMETHYL)INDOLE- 4,7-DIONE
C18 H17 N O4
JRPJCFILHCLEJI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.200
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 55.64 α = 76.80
b = 57.03 β = 76.93
c = 96.88 γ = 86.28

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-11-06
  • Released Date: 2002-01-16
  • Deposition author(s): Faig, M., Bianchet, M.A., Amzel, L.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4