1K8N

NMR structure of the XBY2 DNA duplex, an analog of CK14 containing phosphorodithioate groups at C22 and C24


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 10
  • Conformers Submitted: 1
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 1K8N

Classification: DNA

Total Structure Weight: 8625.84

Macromolecule Entities
Molecule Chains Length Organism Details
FIRST STRAND OF CK14 DNA DUPLEX A 14 synthetic CK14 IS A SUBUNIT OF THE NF-KB BINDING SITE CK1
SECOND STRAND OF CK14 DNA DUPLEX B 14 synthetic CK14 IS A SUBUNIT OF THE NF-KB BINDING SITE CK1

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
C2S
Query on C2S
B DNA LINKING C9 H14 N3 O5 P S2 DC

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 10
  • Conformers Submitted: 1
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-10-24
  • Released Date: 2003-04-15
  • Deposition author(s): Volk, D.E., Yang, X., Fennewald, S.M., King, D.J., Bassett, S.E., Venkitachalam, S., Herzog, N., Luxon, B.A., Gorenstein, D.G.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance