1K53

Monomeric Protein L B1 Domain with a G15A Mutation

Structural Biology Knowledgebase: 1K53 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1K53

Classification: PROTEIN BINDING

Total Structure Weight: 16657.07

Macromolecule Entities
Molecule Chains Length Organism Details
Protein L A, B 72 Finegoldia magna Fragment: B1 Domain (Residues 111-173)
Mutation: G15A, Y47W
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.213
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.51 α = 90.00
b = 66.51 β = 90.00
c = 109.19 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-10-09
  • Released Date: 2001-12-05
  • Deposition author(s): O'Neill, J.W., Kim, D.E., Johnsen, K., Baker, D., Zhang, K.Y.J.

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values