1K2O

Cytochrome P450Cam with Bound BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II)

Structural Biology Knowledgebase: 1K2O SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 1K2O

Classification: OXIDOREDUCTASE

Total Structure Weight: 99333.70

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome P450CAM A, B 414 Pseudomonas putida EC#: 1.14.15.1 IUBMB
Mutation: C334A
Gene Name(s): camC cyp101
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RFA
Query on RFA

A, B DELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'- BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II)
C54 H75 F8 N7 Ru
QXSHRHKMCRAIGC-QMGQRXOWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RFB
Query on RFB

A, B LAMBDA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'- BIPYRIDINE)-C2-ADAMANTANE RUTHENIUM (II)
C54 H75 F8 N7 Ru
QXSHRHKMCRAIGC-DMCKNCFYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HEM
Query on HEM

A, B PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CAC
Query on CAC

A, B CACODYLATE ION
dimethylarsinate (Synonym)
C2 H6 As O2
OGGXGZAMXPVRFZ-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.210
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 63.87 α = 71.16
b = 67.05 β = 65.20
c = 72.52 γ = 62.31

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-28
  • Released Date: 2001-10-17
  • Deposition author(s): Dunn, A.R., Dmochowski, I.J., Bilwes, A.M., Gray, H.B., Crane, B.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update