1K0J

Pseudomonas aeruginosa phbh R220Q in complex with NADPH and free of p-OHB

Structural Biology Knowledgebase: 1K0J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 1K0J

Classification: HYDROLASE

Total Structure Weight: 46365.21

Macromolecule Entities
Molecule Chains Length Organism Details
P-HYDROXYBENZOATE HYDROXYLASE A 394 Pseudomonas aeruginosa EC#: 1.14.13.2 IUBMB
Mutation: R220Q
Gene Name(s): pobA PA0247
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDP
Query on NDP

A NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
NDP N/A in BindingDB
Ki: 1100000 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.222
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 71.85 α = 90.00
b = 139.15 β = 90.00
c = 91.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-19
  • Released Date: 2002-02-27
  • Deposition author(s): Wang, J., Ortiz-Maldonado, M., Entsch, B., Ballou, D., Gatti, D.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values