1JWB

Structure of the Covalent Acyl-Adenylate Form of the MoeB-MoaD Protein Complex

Structural Biology Knowledgebase: 1JWB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.188

Literature

Macromolecules
Sequence Display for 1JWB

Classification: LIGASE

Total Structure Weight: 36015.55

Macromolecule Entities
Molecule Chains Length Organism Details
MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN B 249 Escherichia coli EC#: 2.7.7.80 IUBMB
Gene Name(s): moeB chlN b0826 JW0810
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
MOLYBDOPTERIN [MPT] CONVERTING FACTOR, SUBUNIT 1 D 81 Escherichia coli Gene Name(s): moaD chlA4 chlM b0784 JW0767
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AMP
Query on AMP

D ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.188
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 77.23 α = 90.00
b = 77.23 β = 90.00
c = 100.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-03
  • Released Date: 2001-11-21
  • Deposition author(s): Lake, M.W., Wuebbens, M.M., Rajagopalan, K.V., Schindelin, H.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4