1JUQ

GGA3 VHS domain complexed with C-terminal peptide from cation-dependent Mannose 6-phosphate receptor

Structural Biology Knowledgebase: 1JUQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 1JUQ

Classification: SIGNALING PROTEIN

Total Structure Weight: 85275.16

Macromolecule Entities
Molecule Chains Length Organism Details
ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA3 A, B, C, D 171 Homo sapiens Fragment: VHS domain
Mutation: M1M, M73M, M123M, M137M
Gene Name(s): GGA3 Gene View KIAA0154
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Cation-dependent mannose-6-phosphate receptor E, F, G, H 13 Homo sapiens Fragment: C-terminal peptide
Gene Name(s): M6PR Gene View MPR46 MPRD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.221
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 123.64 α = 90.00
b = 131.35 β = 90.00
c = 108.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-26
  • Released Date: 2002-02-27
  • Deposition author(s): Misra, S., Puertollano, R., Bonifacino, J.S., Hurley, J.H.

Revision History

  • 2016-10-12
    Type: Advisory | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4