1JUP

Crystal structure of the multidrug binding transcriptional repressor QacR bound to malachite green

Structural Biology Knowledgebase: 1JUP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.238

Literature

Macromolecules
Sequence Display for 1JUP

Classification: TRANSCRIPTION

Total Structure Weight: 94375.70

Macromolecule Entities
Molecule Chains Length Organism Details
HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION A, B, D, E 194 Staphylococcus aureus Mutation: C72A, C141S
Gene Name(s): qacR SAP100B_005 SAP104C_022
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MGR
Query on MGR

A MALACHITE GREEN
C23 H25 N2
VFCNQNZNPKRXIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, D, E SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.238
  • Space Group: P 42 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 174.20 α = 90.00
b = 174.20 β = 90.00
c = 96.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-24
  • Released Date: 2001-12-12
  • Deposition author(s): Schumacher, M.A., Miller, M.C., Grkovic, S., Brown, M.H., Skurray, R.A., Brennan, R.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4