1JT0

Crystal structure of a cooperative QacR-DNA complex

Structural Biology Knowledgebase: 1JT0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 1JT0

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 109622.52


Macromolecule Entities
Molecule Chains Length Organism Details
HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION A, B, C, D 194 Staphylococcus aureus Mutation: C72A, C141S
Gene Name(s): qacR SAP100B_005 SAP104C_022
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
QACA operator E, F 28 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.222
  • Space Group: P 65
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 174.70 α = 90.00
b = 174.70 β = 90.00
c = 151.95 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-20
  • Released Date: 2002-03-08
  • Deposition author(s): Schumacher, M.A., Miller, M.C., Grkovic, S., Brown, M.H., Skurray, R.A., Brennan, R.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4