1JPJ

GMPPNP Complex of SRP GTPase NG Domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.306
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1JPJ

Classification: SIGNALING PROTEIN

Total Structure Weight: 32994.96

Macromolecule Entities
Molecule Chains Length Organism Details
SIGNAL RECOGNITION PARTICLE PROTEIN A 296 Thermus aquaticus Fragment: NG domain
Gene Name(s): ffh
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GNP
Query on GNP

A PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.306
  • R-Value Work: 0.201
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 52.69 α = 90.00
b = 60.41 β = 90.00
c = 86.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-02
  • Released Date: 2002-02-02
  • Deposition author(s): Padmanabhan, S., Freymann, D.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4