1JPA

Crystal Structure of unphosphorylated EphB2 receptor tyrosine kinase and juxtamembrane region


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.231

Literature

Macromolecules
Sequence Display for 1JPA

Classification: TRANSFERASE

Total Structure Weight: 71661.85

Macromolecule Entities
Molecule Chains Length Organism Details
neural kinase, Nuk=Eph/Elk/Eck family receptor-like tyrosine kinase A, B 312 Mus musculus EC#: 2.7.10.1 IUBMB
Fragment: partial juxtamembrane, entire kinase domain
Mutation: Y604F, Y610F
Gene Name(s): Ephb2 Epth3 Nuk Sek3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ANP
Query on ANP

A, B PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.231
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 47.05 α = 112.95
b = 57.62 β = 103.17
c = 67.74 γ = 91.58

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-01
  • Released Date: 2001-10-03
  • Deposition author(s): Wybenga-Groot, L.E., Pawson, T., Sicheri, F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4