1JP5

Crystal structure of the single-chain Fv fragment 1696 in complex with the epitope peptide corresponding to N-terminus of HIV-1 protease

Structural Biology Knowledgebase: 1JP5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 1JP5

Classification: IMMUNE SYSTEM

Total Structure Weight: 56152.53

Macromolecule Entities
Molecule Chains Length Organism Details
single-chain Fv fragment 1696 A, B 247 Mus musculus Fragment: scFv1696
epitope peptide corresponding to N-terminus of HIV-1 protease C, D 9 synthetic Details: nonapeptide PQITLWQRR


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.229
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 45.49 α = 90.00
b = 57.06 β = 97.07
c = 91.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-01
  • Released Date: 2001-10-12
  • Deposition author(s): Rezacova, P., Lescar, J., Brynda, J., Fabry, M., Horejsi, M., Sedlacek, J., Bentley, G.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4