1JLJ

1.6 Angstrom crystal structure of the human neuroreceptor anchoring and molybdenum cofactor biosynthesis protein gephyrin

Structural Biology Knowledgebase: 1JLJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.147

Literature

Macromolecules
Sequence Display for 1JLJ

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 62505.49

Macromolecule Entities
Molecule Chains Length Organism Details
gephyrin A, B, C 189 Homo sapiens Fragment: residues 1-181
Gene Name(s): GPHN Gene View GPH KIAA1385
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMT
Query on FMT

C FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.147
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 114.27 α = 90.00
b = 66.01 β = 93.27
c = 73.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-16
  • Released Date: 2001-09-21
  • Deposition author(s): Schwarz, G., Schrader, N., Mendel, R.R., Hecht, H.-J., Schindelin, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4