1JC7

The Laminin-Binding Domain of Agrin is Structurally Related to N-TIMP-1

Structural Biology Knowledgebase: 1JC7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.73 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1JC7

Classification: CELL ADHESION

Total Structure Weight: 15182.91

Macromolecule Entities
Molecule Chains Length Organism Details
Agrin A 131 Gallus gallus Fragment: LAMININ-BINDING DOMAIN
Gene Name(s): AGRN Gene View AGRIN
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.73 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.207
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.31 α = 90.00
b = 49.90 β = 118.43
c = 54.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-06-08
  • Released Date: 2001-08-08
  • Deposition author(s): Stetefeld, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4