1J8F

HUMAN SIRT2 HISTONE DEACETYLASE

Structural Biology Knowledgebase: 1J8F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.235

Literature

Macromolecules
Sequence Display for 1J8F

Classification: gene regulation transferase

Total Structure Weight: 109793.02

Macromolecule Entities
Molecule Chains Length Organism Details
SIRTUIN 2, ISOFORM 1 A, B, C 323 Homo sapiens EC#: 3.5.1 IUBMB
Gene Name(s): SIRT2 Gene View SIR2L SIR2L2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.235
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 78.94 α = 90.00
b = 119.07 β = 90.00
c = 218.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-21
  • Released Date: 2001-07-06
  • Deposition author(s): Pavletich, N.P., Finnin, M.S., Donigian, J.R.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4