1J6V

CRYSTAL STRUCTURE OF D. RADIODURANS LUXS, C2

Structural Biology Knowledgebase: 1J6V SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1J6V

Classification: SIGNALING PROTEIN

Total Structure Weight: 18784.59

Macromolecule Entities
Molecule Chains Length Organism Details
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS A 166 Deinococcus radiodurans EC#: 4.4.1.21 IUBMB
Gene Name(s): luxS DR_2387
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.196
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.19 α = 90.00
b = 70.14 β = 112.03
c = 49.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-14
  • Released Date: 2001-06-08
  • Deposition author(s): Lewis, H.A., Furlong, E.B., Bergseid, M.G., Sanderson, W.E., Buchanan, S.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values