NMR Ensemble

1J5N

Solution Structure of the Non-Sequence-Specific HMGB protein NHP6A in complex with SRY DNA

Structural Biology Knowledgebase: 1J5N SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Structures with Acceptable Covalent Geometry

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1J5N

Classification: DNA BINDING PROTEIN / DNA

Total Structure Weight: 20003.53


Macromolecule Entities
Molecule Chains Length Organism Details
Nonhistone chromosomal protein 6A A 93 Saccharomyces cerevisiae Gene Name(s): NHP6A NHPA YPR052C YP9499.09C
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*GP*GP*GP*TP*GP*AP*TP*TP*GP*TP*TP*CP*AP*G)-3' B 15 synthetic SRY_DNA G-rich strand
5'-D(*CP*TP*GP*AP*AP*CP*AP*AP*TP*CP*AP*CP*CP*CP*C)-3' C 15 synthetic SRY_DNA C-rich strand


Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: structures with acceptable covalent geometry

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-15
  • Released Date: 2002-10-16
  • Deposition author(s): Masse, J.E., Wong, B., Yen, Y.-M., Allain, F.H.-T., Johnson, R.C., Feigon, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4