1IL4

STRUCTURE OF RICIN A CHAIN BOUND WITH INHIBITOR 9-DEAZAGUANINE

Structural Biology Knowledgebase: 1IL4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 1IL4

Classification: HYDROLASE

Total Structure Weight: 30087.15

Macromolecule Entities
Molecule Chains Length Organism Details
RICIN A CHAIN A 267 Ricinus communis EC#: 3.2.2.22 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
9DG
Query on 9DG

A 9-DEAZAGUANINE
C6 H6 N4 O
FFYPRJYSJODFFD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
9DG N/A in BindingDB
N/A in BindingMoad
IC50: 1400000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.222
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.70 α = 90.00
b = 68.41 β = 112.80
c = 50.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-07
  • Released Date: 2002-01-16
  • Deposition author(s): Miller, D.J., Ravikumar, K., Shen, H., Suh, J.-K., Kerwin, S.M., Robertus, J.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4