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Structural Basis for Poor Uracil Excision from Hairpin DNA: NMR Study
DOI:10.2210/pdb1ii1/pdb   NDB ID: 1II1
1II1
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 5483.58
    Molecule: 5'-D(*AP*GP*GP*AP*TP*CP*CP*UP*TP*TP*TP*GP*GP*AP*TP*CP*CP*T)-3'
    Polymer: 1 Type: dna Length: 18
    Chains: A
    Details: Uracil containing hairpin DNA
     

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1DGO  Structural basis for uracil DNA Glycosylase interaction with Uracil: NMR study 
    1IDX  Structural basis for poor uracil excision from hairpin DNA: NMR study 
    1QE7  Solution structure of a uracil containing hairpin DNA 
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: 1II1
     
 
Data in orange boxes are gathered from external resources (when available).
 
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  •   Deposition Summary Hide
    Authors:   Ghosh, M.,  Rumpal, N.,  Varshney, U.,  Chary, K.V.

    Deposition:   2001-04-20
    Release:   2002-05-08
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   SOLUTION NMR
    Exp. Data:
    N/A
    NMR Ensemble
    Conformers Calculated:     200
    Conformers Submitted:     10
    Selection Criteria: structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy
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    Method: SOLUTION NMR