Structural Basis for Poor Excision from Hairpin DNA: NMR Study
DOI:10.2210/pdb1idx/pdb   NDB ID: 1IDX
Primary Citation
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 5483.58
    Molecule: 5'-D(*AP*GP*GP*AP*TP*CP*CP*TP*TP*UP*TP*GP*GP*AP*TP*CP*CP*T)-3'
    Polymer: 1 Type: dna Length: 18
    Chains: A
    Details: Uracil containing hairpin DNA

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
  •   Related PDB Entries Hide
    Identifier Details
    1DGO   Structural basis for Uracil DNA Glycosylase interaction with Uracil: NMR study 
    1II1   Structural Basis for Poor Uracil Excision from Hairpin DNA: NMR Study 
    1QE7   Solution structure of a uracil containing hairpin DNA. 
  •   Structural Biology Knowledgebase Data Hide
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:1IDX
Data in orange boxes are gathered from external resources (when available).
Structure Image
Downloadable viewers:
  •   MyPDB Personal Annotations Hide
  •   Deposition Summary Hide
    Authors:   Ghosh, M.,  Rumpal, N.,  Varshney, U.,  Chary, K.V.

    Deposition:   2001-04-05
    Release:   2002-05-08
    Last Modified (REVDAT):   2009-02-24
  •   Revision History    Hide
    Mouse over text for details
    Version format compliance
  •   Experimental Details Hide
    Method:   SOLUTION NMR
    Exp. Data:
    NMR Ensemble
    Conformers Calculated:     200
    Conformers Submitted:     6
    Selection Criteria: structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy
    NMR Refine
    Method: SOLUTION NMR