1I76

COMPLEX OF 2-(BIPHENYL-4-SULFONYL)-1,2,3,4-TETRAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID (D-TIC DERIVATIVE) WITH T CATALITIC DOMAIN OF MATRIX METALLO PROTEINASE-8 (MET80 FORM)

Structural Biology Knowledgebase: 1I76 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.171
  • R-Value Work: 0.129

Literature

Macromolecules
Sequence Display for 1I76

Classification: HYDROLASE

Total Structure Weight: 18716.28

Macromolecule Entities
Molecule Chains Length Organism Details
NEUTROPHIL COLLAGENASE A 163 Homo sapiens EC#: 3.4.24.34 IUBMB
Fragment: RESIDUES 80-242
Gene Name(s): MMP8 Gene View CLG1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BSI
Query on BSI

A 2-(BIPHENYL-4-SULFONYL)-1,2,3,4-TETRAHYDRO- ISOQUINOLINE-3-CARBOXYLIC ACID
C22 H19 N O4 S
BNVMUDXGABBWGP-OAQYLSRUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.171
  • R-Value Work: 0.129
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 32.99 α = 90.00
b = 68.68 β = 90.00
c = 70.58 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-03-08
  • Released Date: 2001-03-21
  • Deposition author(s): Gavuzzo, E., Pochetti, G., Mazza, F., Gallina, C., Gorini, B., D'Alessio, S., Pieper, M., Tschesche, H., Tucker, P.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4