1I37

CRYSTAL STRUCTURE OF THE RAT ANDROGEN RECEPTOR LIGAND BINDING DOMAIN COMPLEX WITH DIHYDROTESTOSTERONE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.312
  • R-Value Work: 0.242

Literature

Macromolecules
Sequence Display for 1I37

Classification: HORMONE / GROWTH FACTOR

Total Structure Weight: 30572.85

Macromolecule Entities
Molecule Chains Length Organism Details
ANDROGEN RECEPTOR A 260 Rattus norvegicus Fragment: LIGAND-BINDING DOMAIN
Gene Name(s): Ar Nr3c4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DHT
Query on DHT

A 5-ALPHA-DIHYDROTESTOSTERONE
C19 H30 O2
NVKAWKQGWWIWPM-ABEVXSGRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
DHT EC50: 0.05 - 20 nM (99 - 100) BindingDB
IC50: 0 nM (99) BindingDB
Ki: 0.2 - 10 nM (99) BindingDB

N/A in BindingMoad
Ki: 0.27 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.312
  • R-Value Work: 0.242
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.08 α = 90.00
b = 65.76 β = 90.00
c = 70.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-13
  • Released Date: 2001-03-21
  • Deposition author(s): Sack, J.S.

Revision History

  • Version 1_0: 2001-03-21

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance