1HJ1

RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH PURE ANTIOESTROGEN ICI164,384

Structural Biology Knowledgebase: 1HJ1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 1HJ1

Classification: NUCLEAR RECEPTOR

Total Structure Weight: 29687.13

Macromolecule Entities
Molecule Chains Length Organism Details
OESTROGEN RECEPTOR BETA A 255 Rattus norvegicus Fragment: LIGAND-BINDING DOMAIN
Details: COMPLEXED WITH THE FULL ANTAGONIST ICI164,384
Gene Name(s): Esr2 Erbeta Nr3a2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AOE
Query on AOE

A N-BUTYL-11-[(7R,8R,9S,13S,14S,17S)-3,17-DIHYDROXY- 13-METHYL-7,8,9,11,12,13,14,15,16,17-DECAHYDRO- 6H-CYCLOPENTA[A]PHENANTHREN-7-YL]-N-METHYLUNDECANAMIDE
C34 H55 N O3
BVVFOLSZMQVDKV-KXQIQQEYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PMB
Query on PMB

A PARA-MERCURY-BENZENESULFONIC ACID
C6 H5 Hg O3 S
KQAOIKIZSJJTII-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.220
  • Space Group: I 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 60.38 α = 90.00
b = 82.67 β = 90.00
c = 106.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-01-08
  • Released Date: 2002-01-04
  • Deposition author(s): Pike, A.C.W., Brzozowski, A.M., Carlquist, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4