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CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
DOI:10.2210/pdb1hc8/pdb   NDB ID: 1HC8
1HC8
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 55455.24
    Molecule: RIBOSOMAL PROTEIN L11
    Polymer: 1 Type: protein Length: 76
    Chains: A, B
    Fragment: C-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L11
    Organism: Geobacillus stearothermophilus
    Gene Name: rplK
    UniProtKB: Protein Feature View | Search PDB | P56210  
    Molecule: 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN
    Polymer: 2 Type: rna Length: 58
    Chains: C, D
    Fragment: NTS 1051-1108 FROM E. COLI 23S RRNA
    Mutation: YES
    Organism: Escherichia coli
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Bacillus stearothermophilus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1ACI  L11 RIBOSOMAL PROTEIN RNA BINDING DOMAIN, NMR, 20 STRUCTURES 
    1C04  IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 AMAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULAMARISMORTUI 
    1FOW  NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF50S RIBOSOMAL PROTEIN L11, MINIMIZED AVERAGE STRUCTURE 
    1FOX  NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF50S RIBOSOMAL PROTEIN L11, 33 STRUCTURES 
    1FOY  THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11:THREE-DIMENSIONAL STRUCTURE OF THE RNA -BOUND FORM OF THEPROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE 
    1QA6  CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNACOMPLEX 
    2FOW  THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11:THREE-DIMENSIONAL STRUCTURE OF THE RNA -BOUND FORM OF THEPROTEIN, NMR, 26 STRUCTURES 
     
  •   Ligand Chemical Component Hide
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    GTP
    Search 
    GTP C10 H16 N5 O14 P3 G nonPolymer
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: 1HC8
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Conn, G.L.,  Draper, D.E.,  Lattman, E.E.,  Gittis, A.G.

    Deposition:   2001-04-27
    Release:   2002-05-23
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.80
    R-Value: 0.217 (obs.)
    R-Free: 0.253
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 150.68 α = 90.00 
    b = 150.68 β = 90.00 
    c = 63.84 γ = 90.00