1H5W

2.1A BACTERIOPHAGE PHI-29 CONNECTOR

Structural Biology Knowledgebase: 1H5W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 1H5W

Classification: VIRUS

Total Structure Weight: 108225.47

Macromolecule Entities
Molecule Chains Length Organism Details
UPPER COLLAR PROTEIN A, B, C 309 Bacillus virus phi29 Gene Name(s): 10
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B, C (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.205
  • Space Group: I 4 2 2

Unit Cell:

Length (Å) Angle (°)
a = 155.34 α = 90.00
b = 155.34 β = 90.00
c = 160.43 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-28
  • Released Date: 2002-02-13
  • Deposition author(s): Guasch, A., Pous, J., Ibarra, B., Gomis-Ruth, F.X., Valpuesta, J.M., Sousa, N., Carrascosa, J.L., Coll, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4