1H5S

THYMIDYLYLTRANSFERASE COMPLEXED WITH TMP

Structural Biology Knowledgebase: 1H5S SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.176

Literature

Macromolecules
Sequence Display for 1H5S

Classification: TRANSFERASE

Total Structure Weight: 133426.48

Macromolecule Entities
Molecule Chains Length Organism Details
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE A 293 Escherichia coli EC#: 2.7.7.24 IUBMB
Mutation: Q185L
Gene Name(s): rfbA rmlA rmlA1 b2039 JW2024
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE B 293 Escherichia coli EC#: 2.7.7.24 IUBMB
Mutation: M217L, M288Q
Gene Name(s): rfbA rmlA rmlA1 b2039 JW2024
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE C 293 Escherichia coli EC#: 2.7.7.24 IUBMB
Gene Name(s): rfbA rmlA rmlA1 b2039 JW2024
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE D 293 Escherichia coli EC#: 2.7.7.24 IUBMB
Mutation: M217L, G102A
Gene Name(s): rfbA rmlA rmlA1 b2039 JW2024

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TMP
Query on TMP

A, B, C, D THYMIDINE-5'-PHOSPHATE
C10 H15 N2 O8 P
GYOZYWVXFNDGLU-XLPZGREQSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.176
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 73.10 α = 90.00
b = 119.27 β = 112.66
c = 81.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-25
  • Released Date: 2001-11-23
  • Deposition author(s): Rosano, C., Zuccotti, S., Bolognesi, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4