1GZS

CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE GEF DOMAIN OF THE SALMONELLA TYPHIMURIUM SOPE TOXIN AND HUMAN CDC42

Structural Biology Knowledgebase: 1GZS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 1GZS

Classification: TOXIN / CELL CYCLE

Total Structure Weight: 76533.82

Macromolecule Entities
Molecule Chains Length Organism Details
GTP-BINDING PROTEIN A, C 180 Homo sapiens Fragment: RESIDUES 1-178
Gene Name(s): CDC42 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
SOPE B, D 165 Salmonella enterica Fragment: GUANINE NUCTLEOTIDE EXCHANGE FACTOR (GEF-DOMAIN), RESIDUES 78-240
Gene Name(s): sopE
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.226
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 87.54 α = 90.00
b = 87.54 β = 90.00
c = 200.51 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-06-05
  • Released Date: 2002-09-12
  • Deposition author(s): Buchwald, G., Friebel, A., Galan, J.E., Hardt, W.D., Wittinghofer, A., Scheffzek, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4