1GXM

FAMILY 10 POLYSACCHARIDE LYASE FROM CELLVIBRIO CELLULOSA

Structural Biology Knowledgebase: 1GXM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.32 Å
  • R-Value Free: 0.162
  • R-Value Work: 0.130

Literature

Macromolecules
Sequence Display for 1GXM

Classification: LYASE

Total Structure Weight: 73792.37

Macromolecule Entities
Molecule Chains Length Organism Details
PECTATE LYASE A, B 332 Cellvibrio japonicus EC#: 4.2.2.2 IUBMB
Fragment: CATALYTIC MODULE, RESIDUES 327-649
Mutation: S479N, R554Q
Gene Name(s): Pel10A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.32 Å
  • R-Value Free: 0.162
  • R-Value Work: 0.130
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 47.67 α = 90.00
b = 106.11 β = 91.95
c = 55.37 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-08
  • Released Date: 2002-10-04
  • Deposition author(s): Charnock, S.J., Brown, I.E., Turkenburg, J.P., Black, G.W., Davies, G.J.

Revision History

  • 2011-10-19
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-10-19
    Type: Version format compliance | Details: REMARK 4
  • 2011-10-19
    Type: Non-polymer description | Details: FORMUL,HETSYN
  • 2011-10-19
    Type: Other | Details: REMARK 525
  • 2011-10-19
    Type: Geometry validation | Details: REMARK 500