1GVQ

STRUCTURE OF PENTAERYTHRITOL TETRANITRATE REDUCTASE AND COMPLEXED WITH 2-CYCLOHEXENONE

Structural Biology Knowledgebase: 1GVQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1GVQ

Classification: FLAVOENZYME

Total Structure Weight: 39956.47

Macromolecule Entities
Molecule Chains Length Organism Details
PENTAERYTHRITOL TETRANITRATE REDUCTASE A 364 Enterobacter cloacae Details: 2-CYCLOHEXENONE IS BOUND IN THE ACTIVE SITE
Gene Name(s): onr
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
A2Q
Query on A2Q

A cyclohex-2-en-1-one
cyclohex-2-enone (Synonym)
C6 H8 O
FWFSEYBSWVRWGL-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.208
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.65 α = 90.00
b = 68.44 β = 90.00
c = 89.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-26
  • Released Date: 2003-02-20
  • Deposition author(s): Barna, T., Moody, P.C.E.

Revision History

  • 2017-03-22
    Type: Non-polymer description | Details: Non-polymer description
  • 2017-03-22
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2017-03-22
    Type: Entry title | Details: Entry title
  • 2013-04-24
    Type: Version format compliance | Details: REMARK 4
  • 2013-04-24
    Type: Citation | Details: REMARK 1
  • 2013-04-24
    Type: Refinement description | Details: REMARK 3
  • 2013-04-24
    Type: Non-polymer description | Details: FORMUL
  • 2013-04-24
    Type: Entry title | Details: TITLE
  • 2013-04-24
    Type: Sequence database correspondence | Details: DBREF
  • 2013-04-24
    Type: Other | Details: REMARK 900
  • 2013-04-24
    Type: Biological assembly | Details: REMARK 300, REMARK 350
  • 2012-04-25
    Type: Geometry validation | Details: REMARK 500
  • 2012-04-25
    Type: Other | Details: REMARK 525,REMARK 280
  • 2012-04-25
    Type: Biological assembly | Details: REMARK 350
  • 2012-04-25
    Type: Entry title | Details: TITLE