1GLJ

ESCHERICHIA COLI GLYCEROL KINASE MUTANT WITH BOUND ATP ANALOG SHOWING SUBSTANTIAL DOMAIN MOTION

Structural Biology Knowledgebase: 1GLJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 1GLJ

Classification: PHOSPHOTRANSFERASE

Total Structure Weight: 113830.94

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCEROL KINASE O, Y 501 Escherichia coli EC#: 2.7.1.30 IUBMB
Mutation: S58W
Gene Name(s): glpK b3926 JW3897
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATS
Query on ATS

O, Y GAMMA-ARSONO-BETA, GAMMA-METHYLENEADENOSINE- 5'-DIPHOSPHATE
C11 H18 As N5 O12 P2
KHQOAQLQNLUEQN-IOSLPCCCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

O, Y GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

Y MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed:
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 99.67 α = 90.00
b = 200.70 β = 90.00
c = 114.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-09-03
  • Released Date: 1999-05-18
  • Deposition author(s): Bystrom, C.E., Pettigrew, D.W., Branchaud, B.P., Remington, S.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update