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S954A MUTANT OF THE FERULOYL ESTERASE MODULE FROM CLOSTRIDIUM THERMOCELLUM COMPLEXED WITH FERULIC ACID
1GKL
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 69721.36
    Molecule: ENDO-1,4-BETA-XYLANASE Y
    Polymer: 1 Type: protein Length: 297
    Chains: A, B
    EC#: 3.2.1.8   
    Fragment: FERULOYL ESTERASE DOMAIN
    Mutation: YES
    Organism: Ruminiclostridium thermocellum
    Gene Name: xynY
    UniProtKB: Protein Feature View | Search PDB | P51584  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Clostridium thermocellum   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1DYO  XYLAN-BINDING DOMAIN FROM CBM 22, FORMALLY X6B DOMAIN 
    1GKK  FERULOYL ESTERASE DOMAIN OF XYNY FROM CLOSTRIDIUM THERMOCELLUM 
    1H6X  THE ROLE OF CONSERVED AMONI ACIDS IN THE CLEFT OF THE C-TERMINAL FAMILY 22 CARBOHYDRATE BINDING MODULE OF CLOSTRIDIUM THERMOCELLUM XYN10B IN LIGAND BINDING 
    1H6Y  THE ROLE OF CONSERVED AMONI ACIDS IN THE CLEFT OF THE C-TERMINAL FAMILY 22 CARBOHYDRATE BINDING MODULE OF CLOSTRIDIUM THERMOCELLUM XYN10B IN LIGAND BINDING 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ACT
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    ACT C2 H3 O2
    ACETATE ION
    CD
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    CD Cd
    CADMIUM ION
    FER
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    FER C10 H10 O4
    3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID
    FER:1GKL
    GOL
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    GOL C3 H8 O3
    GLYCEROL
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Prates, J.A.M.,  Tarbouriech, N.,  Charnock, S.J.,  Fontes, C.M.G.A.,  Ferreira, L.M.A.,  Davies, G.J.

    Deposition:   2001-08-15
    Release:   2001-12-13
    Last Modified (REVDAT):   2011-09-07
     
  •   Revision History    Hide
    Mouse over text for details
    2011-09-07
    Citation
    2011-09-07
    Biological assembly
    2011-09-07
    Geometry validation
    2011-09-07
    Function and keywords
    2011-09-07
    Non-polymer description
    2011-09-07
    Other
    2011-09-07
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.40
    R-Value: 0.144 (obs.)
    R-Free: 0.160
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 65.10 α = 90.00 
    b = 108.23 β = 90.00 
    c = 112.96 γ = 90.00