1GIH

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR

Structural Biology Knowledgebase: 1GIH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.169

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GIH

Classification: TRANSFERASE

Total Structure Weight: 34285.14

Macromolecule Entities
Molecule Chains Length Organism Details
CELL DIVISION PROTEIN KINASE 2 A 298 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1PU
Query on 1PU

A 1-(5-OXO-2,3,5,9B-TETRAHYDRO-1H-PYRROLO[2,1- A]ISOINDOL-9-YL)-3-PYRIDIN-2-YL-UREA
N'-(PYRROLIDINO[2,1-B]ISOINDOLIN-4-ON-8-YL)- N-(PYRIDIN-2-YL)UREA (Synonym)
C17 H16 N4 O2
KLVYMYQTRZCMLE-CYBMUJFWSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
1PU IC50: 80 - 440 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.169
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 73.87 α = 90.00
b = 72.67 β = 90.00
c = 53.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-06
  • Released Date: 2002-02-06
  • Deposition author(s): Ikuta, M., Nishimura, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4