1GHQ

CR2-C3D COMPLEX STRUCTURE

Structural Biology Knowledgebase: 1GHQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.195

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GHQ

Classification: Immune system / viral protein receptor

Total Structure Weight: 64491.90

Macromolecule Entities
Molecule Chains Length Organism Details
COMPLEMENT C3 A 308 Homo sapiens Fragment: FRAGMENT OF ALPHA CHAIN
Mutation: C17A
Gene Name(s): C3 Gene View CPAMD1
CR2/CD121/C3D/EPSTEIN-BARR VIRUS RECEPTOR B, C 134 Homo sapiens Fragment: SEQUENCE DATABASE RESIDUES 21-153
Gene Name(s): CR2 Gene View C3DR

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

B, C 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.195
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 170.00 α = 90.00
b = 170.00 β = 90.00
c = 174.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-01-11
  • Released Date: 2001-06-13
  • Deposition author(s): Szakonyi, G., Guthridge, J.M., Li, D., Holers, V.M., Chen, X.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4