1GE7

ZINC PEPTIDASE FROM GRIFOLA FRONDOSA

Structural Biology Knowledgebase: 1GE7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 1GE7

Classification: HYDROLASE

Total Structure Weight: 36608.18

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDYL-LYS METALLOENDOPEPTIDASE A, B 167 Grifola frondosa EC#: 3.4.24.20 IUBMB
Gene Name(s): MEP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MAN
Query on MAN

A, B ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.179
  • Space Group: P 43
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 30.20 α = 90.00
b = 30.20 β = 90.00
c = 308.05 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-11
  • Released Date: 2001-03-14
  • Deposition author(s): Hori, T., Kumasaka, T., Yamamoto, M., Nonaka, T., Tanaka, N., Hashimoto, Y., Ueki, T., Takio, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4