1G4S

THIAMIN PHOSPHATE SYNTHASE

Structural Biology Knowledgebase: 1G4S SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1G4S

Classification: TRANSFERASE

Total Structure Weight: 49408.51

Macromolecule Entities
Molecule Chains Length Organism Details
THIAMIN PHOSPHATE SYNTHASE A, B 226 Bacillus subtilis EC#: 2.5.1.3 IUBMB
Mutation: S130A
Details: COMPLEXED WITH THIAMIN PHOSPHATE
Gene Name(s): thiE thiC ywbK BSU38290 ipa-26d
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TPS
Query on TPS

A, B THIAMIN PHOSPHATE
C12 H18 N4 O4 P S
HZSAJDVWZRBGIF-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
POP
Query on POP

A, B PYROPHOSPHATE 2-
H2 O7 P2
XPPKVPWEQAFLFU-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.207
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 76.99 α = 90.00
b = 76.99 β = 90.00
c = 139.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-27
  • Released Date: 2001-09-26
  • Deposition author(s): Peapus, D.H., Chiu, H.-J., Campobasso, N., Reddick, J.J., Begley, T.P., Ealick, S.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4