1G4Q

RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG

Structural Biology Knowledgebase: 1G4Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.186
  • R-Value Work: 0.143

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1G4Q

Classification: DNA-RNA HYBRID

Total Structure Weight: 6485.51

Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' A 10 synthetic
5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3' B 10 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.186
  • R-Value Work: 0.143
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 25.70 α = 90.00
b = 41.07 β = 90.00
c = 46.11 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2000-10-27
  • Released Date: 2003-07-08
  • Deposition author(s): Han, G.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4