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RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG
DOI:10.2210/pdb1g4q/pdb   NDB ID: AH0012
1G4Q
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA RNA Hybrid
    Structure Weight: 6485.51
    Molecule: 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'
    Polymer: 1 Type: rna Length: 10
    Chains: A
    Fragment: POLYPURINE TRACT OF HIV-1
    Molecule: 5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3'
    Polymer: 2 Type: dna Length: 10
    Chains: B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
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    CA Ca
    CALCIUM ION
    MPD
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    MPD C6 H14 O2
    (4S)-2-METHYL-2,4-PENTANEDIOL
    MPD:1G4Q
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: AH0012
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Han, G.W.

    Deposition:   2000-10-27
    Release:   2003-07-08
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.15
    R-Value: 0.143 (work)
    R-Free: 0.186
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 25.70 α = 90.00 
    b = 41.07 β = 90.00 
    c = 46.11 γ = 90.00