1G3L

THE STRUCTURAL BASIS OF THE CATALYTIC MECHANISM AND REGULATION OF GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (RMLA). TDP-L-RHAMNOSE COMPLEX.

Structural Biology Knowledgebase: 1G3L SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 1G3L

Classification: TRANSFERASE

Total Structure Weight: 134823.44

Macromolecule Entities
Molecule Chains Length Organism Details
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE A, B, C, D 293 Pseudomonas aeruginosa EC#: 2.7.7.24 IUBMB
Gene Name(s): rmlA PA5163
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRH
Query on TRH

A, B, C, D 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE
C16 H26 N2 O15 P2
ZOSQFDVXNQFKBY-CGAXJHMRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.204
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 71.09 α = 90.00
b = 138.56 β = 90.00
c = 139.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-24
  • Released Date: 2000-12-27
  • Deposition author(s): Blankenfeldt, W., Asuncion, M., Lam, J.S., Naismith, J.H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4