1FXF

CARBOXYLIC ESTER HYDROLASE COMPLEX (DIMERIC PLA2 + MJ33 INHIBITOR + PHOSPHATE IONS)

Structural Biology Knowledgebase: 1FXF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1FXF

Classification: HYDROLASE

Total Structure Weight: 29067.10

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOLIPASE A2, MAJOR ISOENZYME A, B 124 Sus scrofa EC#: 3.1.1.4 IUBMB
Gene Name(s): PLA2G1B Gene View

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MJI
Query on MJI

A 1-HEXADECYL-3-TRIFLUOROETHYL-SN-GLYCERO-2- PHOSPHATE METHANE
MJ33 INHIBITOR (Synonym)
C22 H44 F3 O6 P
XPTFBVFCGHXMRK-OAQYLSRUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.161
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 65.04 α = 90.00
b = 65.04 β = 90.00
c = 62.75 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-25
  • Released Date: 2001-09-25
  • Deposition author(s): Pan, Y.H., Epstein, T.M., Jain, M.K., Bahnson, B.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4