1FTD

5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'-SYMMETRIC BIS-BENZIMIDAZOLE COMPLEX


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.244

Literature

Macromolecules
Sequence Display for 1FTD

Classification: DNA

Total Structure Weight: 7939.83

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') A, B 12 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
E97
Query on E97

A [3-(4-{2'-[4-(3-DIMETHYLAMINO-PROPOXY)-PHENYL]- 3H,3'H-[5,5']BIBENZOIMIDAZOLYL-2-YL}-PHENOXY)- PROPYL]-DIMETHYL-AMINE
C36 H40 N6 O2
MZGMYDKOHYOXKR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.244
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 25.15 α = 90.00
b = 39.94 β = 90.00
c = 65.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-12
  • Released Date: 2001-02-26
  • Deposition author(s): Mann, J., Baron, A., Opoku-Boahen, Y., Johansson, E., Parkinson, G., Kelland, L.R., Neidle, S.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance