1FR8

CRYSTAL STRUCTURE OF THE BOVINE BETA 1,4 GALACTOSYLTRANSFERASE (B4GALT1) CATALYTIC DOMAIN COMPLEXED WITH URIDINE DIPHOSPHOGALACTOSE

Structural Biology Knowledgebase: 1FR8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.237

Literature

Macromolecules
Sequence Display for 1FR8

Classification: TRANSFERASE

Total Structure Weight: 67278.85

Macromolecule Entities
Molecule Chains Length Organism Details
BETA 1,4 GALACTOSYLTRANSFERASE A, B 288 Bos taurus Fragment: CATALYTIC DOMAIN
Mutation: I158V, L187P
Gene Name(s): B4GALT1 Gene View GALT Gene View GGTB2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDU
Query on GDU

A, B GALACTOSE-URIDINE-5'-DIPHOSPHATE
UDP-D-GALACTOPYRANOSE (Synonym)
C15 H24 N2 O17 P2
HSCJRCZFDFQWRP-ABVWGUQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.237
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 104.72 α = 90.00
b = 161.37 β = 90.00
c = 106.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-07
  • Released Date: 2000-09-20
  • Deposition author(s): Gastinel, L.N., Cambillau, C., Bourne, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4