1FNO

PEPTIDASE T (TRIPEPTIDASE)

Structural Biology Knowledgebase: 1FNO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 1FNO

Classification: HYDROLASE

Total Structure Weight: 47003.18

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDASE T A 417 Salmonella enterica EC#: 3.4.11 IUBMB
Mutation: M1M, M45M, M59M, M116M, M149M, M231M, M266M, M275M, M294M, M295M, M322M, M340M, M349M, M364M, M390M
Gene Name(s): pepT STM1227
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.222
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.37 α = 90.00
b = 46.04 β = 116.11
c = 96.59 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-22
  • Released Date: 2002-03-13
  • Deposition author(s): Hakansson, K., Miller, C.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values