1FMB

EIAV PROTEASE COMPLEXED WITH THE INHIBITOR HBY-793

Structural Biology Knowledgebase: 1FMB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.136

Literature

Macromolecules
Sequence Display for 1FMB

Classification: HYDROLASE (ACID PROTEINASE)

Total Structure Weight: 11959.12

Macromolecule Entities
Molecule Chains Length Organism Details
EIAV PROTEASE A 104 Equine infectious anemia virus EC#: 3.4.23.16 IUBMB
Mutation: I54G
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HYB
Query on HYB

A [2-(2-METHYL-PROPANE-2-SULFONYLMETHYL)-3- NAPHTHALEN-1-YL-PROPIONYL-VALINYL]-PHENYLALANINOL
C32 H42 N2 O5 S
DRAZKRRTKFXIQX-XQFUHLNNSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
HYB N/A in BindingDB
Ki: 0.1 nM  BindingMOAD
Ki: 0.1 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed:
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 42.93 α = 90.00
b = 45.71 β = 110.50
c = 56.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-02-27
  • Released Date: 1996-10-14
  • Deposition author(s): Wlodawer, A., Gustchina, A., Zdanov, A., Kervinen, J.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4