1FLS

SOLUTION STRUCTURE OF THE CATALYTIC FRAGMENT OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED WITH A HYDROXAMIC ACID INHIBITOR

Structural Biology Knowledgebase: 1FLS SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria:

Literature

Macromolecules
Sequence Display for 1FLS

Classification: HYDROLASE

Total Structure Weight: 19206.29

Macromolecule Entities
Molecule Chains Length Organism Details
COLLAGENASE-3 A 165 Homo sapiens EC#: 3.4.24 IUBMB
Fragment: CATALYTIC FRAGMENT
Details: HYDROXAMIC ACID INHIBITOR COMPLEX
Gene Name(s): MMP13 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
WAY
Query on WAY

A N-HYDROXY-2-[(4-METHOXY-BENZENESULFONYL)- PYRIDIN-3-YLMETHYL-AMINO]-3-METHYL-BENZAMIDE
WAY-151693 (Synonym)
C21 H21 N3 O5 S
AINJYWXKBKRQSX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
WAY IC50: 7.9 - 18 nM (100) BindingDB

N/A in BindingMoad
IC50: 33 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: --

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-15
  • Released Date: 2001-08-15
  • Deposition author(s): Moy, F.J., Chanda, P.K., Chen, J.M., Cosmi, S., Edris, W., Levin, J.I., Powers, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4