1FJ4

THE STRUCTURE OF BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I IN COMPLEX WITH THIOLACTOMYCIN, IMPLICATIONS FOR DRUG DESIGN

Structural Biology Knowledgebase: 1FJ4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1FJ4

Classification: TRANSFERASE

Total Structure Weight: 171467.44

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE I A, B, C, D 406 Escherichia coli EC#: 2.3.1.41 IUBMB
Gene Name(s): fabB fabC b2323 JW2320
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TLM
Query on TLM

A, B, C, D THIOLACTOMYCIN
4-HYDROXY-3,5-DIMETHYL-5-(2-METHYL-BUTA-1,3- DIENYL)-5H-THIOPHEN-2-ONE (Synonym)
C11 H14 O2 S
SYQNUQSGEWNWKV-XUIVZRPNSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TLM IC50: 12000 nM (100) BindingDB

IC50: 25000 nM  BindingMOAD
Kd: 26000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.197
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.07 α = 90.00
b = 138.97 β = 90.00
c = 211.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-07
  • Released Date: 2000-08-23
  • Deposition author(s): Price, A.C., Choi, K., Heath, R.J., Li, Z., White, S.W., Rock, C.O.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4