1FFO

CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH SYNTHETIC PEPTIDE GP33 (C9M/K1A)

Structural Biology Knowledgebase: 1FFO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.246

Literature

Macromolecules
Sequence Display for 1FFO

Classification: IMMUNE SYSTEM / SIGNALING PROTEIN

Total Structure Weight: 89254.97

Macromolecule Entities
Molecule Chains Length Organism Details
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN A, D 273 Mus musculus Fragment: EXTRACELLULAR PORTION
Gene Name(s): H2-D1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BETA-2 MICROGLOBULIN BETA CHAIN B, E 100 Mus musculus Fragment: BETA-2 MICROGLOBULIN
Gene Name(s): B2m
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PEPTIDE WITH SEQUENCE ALA-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET C, F 9 synthetic Fragment: GP33 PEPTIDE WITH SUBSTITUTION
Details: SYNTHETIC


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.246
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 47.22 α = 74.57
b = 68.64 β = 73.08
c = 81.53 γ = 69.86

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-25
  • Released Date: 2002-12-11
  • Deposition author(s): Wang, B, Sharma, A., Maile, R., Saad, M., Collins, E.J., Frelinger, J.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4