1FEU

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA.

Structural Biology Knowledgebase: 1FEU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.208

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1FEU

Classification: RIBOSOME

Total Structure Weight: 74374.00


Macromolecule Entities
Molecule Chains Length Organism Details
50S RIBOSOMAL PROTEIN L25 A, D 206 Thermus thermophilus Gene Name(s): rplY rpl25 rptL5
Macromolecule Entities
Molecule Chains Length Organism Details
19 NT FRAGMENT OF 5S RRNA B, E 19 synthetic
21 NT FRAGMENT OF 5S RRNA C, F 21 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CD
Query on CD

A, D CADMIUM ION
Cd
WLZRMCYVCSSEQC-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
MG
Query on MG

B, C, D, E, F MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.208
  • Space Group: P 31 1 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 109.90 α = 90.00
b = 109.90 β = 90.00
c = 137.51 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-23
  • Released Date: 2001-06-25
  • Deposition author(s): Fedorov, R.V., Meshcheryakov, V.A., Gongadze, G.M., Fomenkova, N.P., Nevskaya, N.A., Selmer, M., Laurberg, M., Kristensen, O., Al-Karadaghi, S., Liljas, A., Garber, M.B., Nikonov, S.V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4