1FBY

CRYSTAL STRUCTURE OF THE HUMAN RXR ALPHA LIGAND BINDING DOMAIN BOUND TO 9-CIS RETINOIC ACID

Structural Biology Knowledgebase: 1FBY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.228

Literature

Macromolecules
Sequence Display for 1FBY

Classification: TRANSCRIPTION

Total Structure Weight: 54111.10

Macromolecule Entities
Molecule Chains Length Organism Details
RETINOIC ACID RECEPTOR RXR-ALPHA A, B 239 Homo sapiens Fragment: LIGAND BINDING DOMAIN
Gene Name(s): RXRA Gene View NR2B1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
9CR
Query on 9CR

A, B (9cis)-retinoic acid
C20 H28 O2
SHGAZHPCJJPHSC-ZVCIMWCZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.228
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 66.32 α = 90.00
b = 86.36 β = 90.00
c = 90.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-17
  • Released Date: 2000-07-28
  • Deposition author(s): Egea, P.F., Mitschler, A., Rochel, N., Ruff, M., Chambon, P., Moras, D.

Revision History

  • 2016-11-09
    Type: Non-polymer description | Details: REA changed to 9CR, correct isomer
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4