1FBV

STRUCTURE OF A CBL-UBCH7 COMPLEX: RING DOMAIN FUNCTION IN UBIQUITIN-PROTEIN LIGASES

Structural Biology Knowledgebase: 1FBV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.227

Literature

Macromolecules
Sequence Display for 1FBV

Classification: LIGASE

Total Structure Weight: 64330.76

Macromolecule Entities
Molecule Chains Length Organism Details
SIGNAL TRANSDUCTION PROTEIN CBL A 388 Homo sapiens EC#: 6.3.2 IUBMB
Gene Name(s): CBL Gene View CBL2 RNF55
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ZAP-70 PEPTIDE B 9 Homo sapiens EC#: 2.7.10.2 IUBMB
Gene Name(s): ZAP70 Gene View SRK
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
UBIQUITIN-CONJUGATING ENZYME E12-18 KDA UBCH7 C 154 Homo sapiens EC#: 2.3.2.23 IUBMB
Gene Name(s): UBE2L3 Gene View UBCE7 UBCH7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PTR
Query on PTR
B L-PEPTIDE LINKING C9 H12 N O6 P TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.227
  • Space Group: P 41 3 2

Unit Cell:

Length (Å) Angle (°)
a = 219.00 α = 90.00
b = 219.00 β = 90.00
c = 219.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-17
  • Released Date: 2000-08-30
  • Deposition author(s): Zheng, N., Wang, P., Jeffrey, P.D., Pavletich, N.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4