1EUF

BOVINE DUODENASE(NEW SERINE PROTEASE), CRYSTAL STRUCTURE

Structural Biology Knowledgebase: 1EUF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 1EUF

Classification: HYDROLASE

Total Structure Weight: 25473.24

Macromolecule Entities
Molecule Chains Length Organism Details
DUODENASE A 227 Bos taurus EC#: 3.4.21 IUBMB
Mutation: R188K, K217R, P236S, K239H, R240S, V241T, Y243R, L244R, F245Y
Gene Name(s): BDMD1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.179
  • Space Group: P 64
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 100.12 α = 90.00
b = 100.12 β = 90.00
c = 39.75 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-04-14
  • Released Date: 2001-04-14
  • Deposition author(s): Pletnev, V.Z., Zamolodchikova, T.S., Pangborn, W.A., Duax, W.L.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4