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SOLUTION STRUCTURE OF A HNA-RNA HYBRID
DOI:10.2210/pdb1ejz/pdb   NDB ID: 1EJZ
1EJZ
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA
    Structure Weight: 5237.51
    Molecule: RNA (5'-R(*CP*GP*CP*UP*AP*CP*GP*C)-3')
    Polymer: 1 Type: rna Length: 8
    Chains: A
    Molecule: DNA (5'-H(*(6HG)P*(6HC)P*(6HG)P*(6HT)P*(6HA)P*(6HG)P*(6HC)P*(6HG))-3')
    Polymer: 2 Type: dna Length: 8
    Chains: B
    Details: THE SUGAR MOIETIES ARE NOT DEOXYRIBOSE BUT D-ARABINO-HEXITOL
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1EC4  Solution Structure of a Hexitol Nucleic Acid Duplex with Four Consecustive T:T Base Pairs 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    PDI
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    PDI C3 H9 O5 P
    PHOSPHORIC ACID MONO-(3-HYDROXY-PROPYL) ESTER
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    6HG
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    6HG C11 H16 N5 O7 P DG dnaLinking
    6HC
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    6HC C10 H16 N3 O7 P DC dnaLinking
    6HT
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    6HT C11 H17 N2 O8 P DT dnaLinking
    6HA
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    6HA C11 H16 N5 O6 P DA dnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: 1EJZ
     
 
Data in orange boxes are gathered from external resources (when available).
 
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  •   Deposition Summary Hide
    Authors:   Lescrnier, E.,  Esnouf, R.,  Heus, H.A.,  Hilbers, C.W.,  Herdewijn, P.

    Deposition:   2000-03-06
    Release:   2000-10-23
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   SOLUTION NMR
    Exp. Data:
    N/A
    NMR Ensemble
    Conformers Calculated:     100
    Conformers Submitted:     1
    Selection Criteria: structure closest to the average of all refined structures
    NMR Refine
    Method: SOLUTION NMR